History¶
1.2.3 (2023-06-02)¶
- Fixed imports in our fork of pyvenn
1.2.2 (2023-06-01)¶
- Fixed broken Pyvenn dependency
1.2.1 (2023-05-09)¶
- Update PyVCF to PyVCF3
1.2.0 (2019-04-04)¶
- Fix defect in narrow command wrongly printing ALT=. when GT=.
- Add the
count
command to count samples, positions, calls, snps, indels, other variants, filtered calls, missing calls, and filter reasons. - Add the
plot
command to plot calls along the length of the genome and show the location of filtered calls. - Change the text of the compare report to refer to “Calls”, not “Sample snps”.
- Drop support for Python 3.4, which is not supported by matplotlib.
- Add support for Python 3.7.
1.1.1 (2019-03-26)¶
- Replace None with ‘.’ when printing call data.
- Support VCF files with multiple alternate alleles per position.
1.1.0 (2019-02-06)¶
- Support reading gzip compressed vcf files.
1.0.0 (2018-11-20)¶
- First public release.